Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit alpha | ATU_RS22085 | Not Available | Positive | 1869361 - 1872243 | 105244.0 |
| formate dehydrogenase subunit delta | ATU_RS22090 | Not Available | Positive | 1872318 - 1872662 | 12406.8 |
| ofa family mfs transporter | ATU_RS22095 | Not Available | Positive | 1872778 - 1874430 | 57768.6 |
| sensor histidine kinase | ATU_RS22100 | Not Available | Negative | 1874533 - 1875891 | 49338.5 |
| response regulator transcription factor | ATU_RS22105 | Not Available | Negative | 1875888 - 1876550 | 24439.6 |
| hypothetical protein | ATU_RS22110 | Not Available | Positive | 1876684 - 1877253 | 19610.4 |
| duf992 domain-containing protein | ATU_RS22115 | Not Available | Negative | 1877357 - 1877863 | 16757.3 |
| bon domain-containing protein | ATU_RS22120 | Not Available | Negative | 1877860 - 1878183 | 11527.8 |
| csbd family protein | ATU_RS22125 | Not Available | Negative | 1878215 - 1878394 | 6357.62 |
| pas domain s-box protein | ATU_RS22130 | Not Available | Negative | 1878534 - 1880012 | 55560.9 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

