Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase subunit beta | ATU_RS21290 | Not Available | Negative | 1686456 - 1687196 | 27693.2 |
| 4-carboxymuconolactone decarboxylase | ATU_RS21295 | Not Available | Negative | 1687193 - 1687627 | 15736.5 |
| 3-oxoadipate enol-lactonase | ATU_RS21300 | Not Available | Negative | 1687631 - 1688428 | 28675.4 |
| pca operon transcription factor pcaq | ATU_RS21305 | Not Available | Positive | 1688524 - 1689459 | 33548.0 |
| 4-hydroxybenzoate 3-monooxygenase | ATU_RS21310 | Not Available | Negative | 1689531 - 1690703 | 43635.8 |
| helix-turn-helix domain-containing protein | ATU_RS21315 | Not Available | Positive | 1690822 - 1691745 | 34320.6 |
| iclr family transcriptional regulator | ATU_RS21320 | Not Available | Negative | 1691715 - 1692476 | 27425.8 |
| 3-oxoacid coa-transferase subunit a | ATU_RS21325 | Not Available | Positive | 1692615 - 1693322 | 24859.9 |
| coa transferase subunit b | ATU_RS21330 | Not Available | Positive | 1693319 - 1694014 | 24870.8 |
| 3-oxoadipyl-coa thiolase | ATU_RS21335 | Not Available | Positive | 1694025 - 1695230 | 41650.1 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

