Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | ATU_RS21240 | Not Available | Positive | 1678465 - 1679157 | 26331.5 |
| type ii 3-dehydroquinate dehydratase | ATU_RS21245 | Not Available | Negative | 1679132 - 1679575 | 16199.2 |
| shikimate dehydrogenase | ATU_RS21250 | Not Available | Negative | 1679572 - 1680441 | 31290.8 |
| amino acid abc transporter atp-binding protein | ATU_RS21255 | Not Available | Negative | 1680513 - 1681274 | 27922.9 |
| transporter substrate-binding domain-containing protein | ATU_RS21260 | Not Available | Negative | 1681305 - 1682141 | 29784.5 |
| transporter substrate-binding domain-containing protein | ATU_RS21265 | Not Available | Negative | 1682178 - 1683017 | 29793.7 |
| amino acid abc transporter permease | ATU_RS21270 | Not Available | Negative | 1683061 - 1683711 | 23042.8 |
| amino acid abc transporter permease | ATU_RS21275 | Not Available | Negative | 1683722 - 1684390 | 24065.3 |
| 3-carboxy-cis,cis-muconate cycloisomerase | ATU_RS21280 | Not Available | Negative | 1684759 - 1685820 | 37281.9 |
| protocatechuate 3,4-dioxygenase subunit alpha | ATU_RS21285 | Not Available | Negative | 1685833 - 1686453 | 22879.0 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

