Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | ATU_RS21140 | Not Available | Negative | 1654109 - 1655236 | 41208.3 |
| 5-deoxy-glucuronate isomerase | ATU_RS21145 | Not Available | Negative | 1655460 - 1656272 | 30044.2 |
| myo-inosose-2 dehydratase | ATU_RS21150 | Not Available | Negative | 1656372 - 1657280 | 32797.0 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | ATU_RS21155 | Not Available | Negative | 1657282 - 1659108 | 65850.5 |
| bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolase | ATU_RS21160 | Not Available | Negative | 1659105 - 1661021 | 69975.2 |
| murr/rpir family transcriptional regulator | ATU_RS21165 | Not Available | Negative | 1661227 - 1662042 | 29121.0 |
| abc transporter atp-binding protein | ATU_RS21170 | Not Available | Negative | 1662144 - 1662860 | 25471.1 |
| abc transporter atp-binding protein | ATU_RS21175 | Not Available | Negative | 1662841 - 1663605 | 27306.2 |
| branched-chain amino acid abc transporter permease | ATU_RS21180 | Not Available | Negative | 1663602 - 1664609 | 34556.0 |
| branched-chain amino acid abc transporter permease | ATU_RS21185 | Not Available | Negative | 1664611 - 1665474 | 30271.3 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

