Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | ATU_RS14440 | Not Available | Negative | 141063 - 141944 | 33109.0 |
| helix-turn-helix domain-containing protein | ATU_RS14445 | Not Available | Positive | 142157 - 143083 | 35149.4 |
| trap transporter large permease | ATU_RS14450 | Not Available | Negative | 143113 - 144393 | 44947.1 |
| trap transporter small permease | ATU_RS14455 | Not Available | Negative | 144394 - 144915 | 18836.4 |
| trap transporter substrate-binding protein | ATU_RS14460 | Not Available | Negative | 144986 - 145963 | 35894.3 |
| d-galactarolactone isomerase | ATU_RS14465 | Not Available | Negative | 146107 - 146985 | 31985.2 |
| d-galactarolactone cycloisomerase | ATU_RS14470 | Not Available | Negative | 146982 - 148118 | 41458.7 |
| 5-dehydro-4-deoxyglucarate dehydratase | ATU_RS14475 | Not Available | Negative | 148144 - 149055 | 32487.2 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | ATU_RS14480 | Not Available | Negative | 149169 - 149912 | 25748.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | ATU_RS14485 | Not Available | Negative | 149909 - 150733 | 30524.2 |
Pathways
525 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

