Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubix family flavin prenyltransferase | ATU_RS20590 | Not Available | Negative | 1529701 - 1530291 | 20771.6 |
| ubid family decarboxylase | ATU_RS20595 | Not Available | Negative | 1530288 - 1531814 | 56685.1 |
| duf488 domain-containing protein | ATU_RS20600 | Not Available | Negative | 1531871 - 1532221 | 13456.1 |
| ubiquinone anaerobic biosynthesis accessory factor ubit | ATU_RS20605 | Not Available | Positive | 1532371 - 1532886 | 18630.9 |
| ubiquinone anaerobic biosynthesis protein ubiu | ATU_RS20610 | Not Available | Positive | 1532877 - 1533854 | 35505.2 |
| ubiquinone anaerobic biosynthesis protein ubiv | ATU_RS20615 | Not Available | Positive | 1533851 - 1534798 | 34274.1 |
| hypothetical protein | ATU_RS20620 | Not Available | Positive | 1534795 - 1535172 | 13650.4 |
| tonb-dependent receptor family protein | ATU_RS20625 | Not Available | Positive | 1535270 - 1537423 | 76328.1 |
| abc transporter substrate-binding protein | ATU_RS20630 | Not Available | Positive | 1537442 - 1538425 | 33980.2 |
| abc transporter permease | ATU_RS20635 | Not Available | Positive | 1538431 - 1539240 | 28605.2 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

