Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | ATU_RS20345 | Not Available | Positive | 1477260 - 1479938 | 96511.6 |
| hcp family type vi secretion system effector | ATU_RS20350 | Not Available | Positive | 1479996 - 1480472 | 17317.3 |
| rap1a/tai family immunity protein | ATU_RS20355 | Not Available | Positive | 1480579 - 1480968 | 13737.4 |
| type vi secretion system amidase effector protein tae4 | ATU_RS20360 | Not Available | Positive | 1480980 - 1481480 | 18272.4 |
| type vi secretion system tip protein vgrg | ATU_RS20365 | Not Available | Positive | 1481495 - 1483945 | 88528.5 |
| duf4123 domain-containing protein | ATU_RS20370 | Not Available | Positive | 1483948 - 1484904 | 34606.1 |
| polymorphic toxin type 15 domain-containing protein | ATU_RS20375 | Not Available | Positive | 1484901 - 1485737 | 29513.0 |
| gad-like domain-containing protein | ATU_RS20380 | Not Available | Positive | 1485765 - 1486439 | 24946.2 |
| paar domain-containing protein | ATU_RS20385 | Not Available | Positive | 1486452 - 1486757 | 10371.6 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | ATU_RS20390 | Not Available | Negative | 1486896 - 1488842 | 71762.5 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

