Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | ATU_RS20095 | Not Available | Positive | 1417206 - 1418039 | 29837.8 |
| shikimate dehydrogenase | ATU_RS20100 | Not Available | Negative | 1418147 - 1418995 | 30121.2 |
| gmc family oxidoreductase | ATU_RS20105 | Not Available | Negative | 1418985 - 1420568 | 57887.0 |
| helix-turn-helix domain-containing protein | ATU_RS20110 | Not Available | Positive | 1420708 - 1421601 | 33300.8 |
| mechanosensitive ion channel family protein | ATU_RS20115 | Not Available | Negative | 1421591 - 1423609 | 73289.5 |
| rrf2 family transcriptional regulator | ATU_RS20120 | Not Available | Positive | 1423954 - 1424484 | 19232.3 |
| response regulator transcription factor | ATU_RS20125 | Not Available | Positive | 1424686 - 1425321 | 23168.1 |
| sdr family oxidoreductase | ATU_RS20130 | Not Available | Positive | 1425633 - 1426391 | 26865.1 |
| cupin domain-containing protein | ATU_RS20135 | Not Available | Positive | 1426469 - 1426882 | 14492.0 |
| cbs domain-containing protein | ATU_RS20140 | Not Available | Positive | 1427019 - 1427450 | 15555.0 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

