Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | ATU_RS20045 | Not Available | Positive | 1407379 - 1408143 | 27814.7 |
| abc transporter substrate-binding protein | ATU_RS20050 | Not Available | Positive | 1408174 - 1409010 | 30482.0 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | ATU_RS20055 | Not Available | Positive | 1409104 - 1409778 | 23760.7 |
| type 1 glutamine amidotransferase domain-containing protein | ATU_RS20060 | Not Available | Negative | 1409923 - 1410762 | 29724.5 |
| type 1 glutamine amidotransferase domain-containing protein | ATU_RS20065 | Not Available | Negative | 1410846 - 1411538 | 24155.5 |
| lysr family transcriptional regulator | ATU_RS20070 | Not Available | Positive | 1411727 - 1412626 | 33283.2 |
| is21 family transposase | ATU_RS20075 | Not Available | Negative | 1412652 - 1413776 | 39040.4 |
| lysr substrate-binding domain-containing protein | ATU_RS20080 | Not Available | Negative | 1413855 - 1414763 | 33366.3 |
| mfs transporter | ATU_RS20085 | Not Available | Positive | 1414920 - 1416101 | 40438.9 |
| llm class oxidoreductase | ATU_RS20090 | Not Available | Positive | 1416166 - 1417191 | 36885.1 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

