Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | C58 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Tracheophyta |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1830 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | ATU_RS19995 | Not Available | Positive | 1398378 - 1399769 | 49985.7 |
| hypothetical protein | ATU_RS20000 | Not Available | Positive | 1399766 - 1400194 | 14432.5 |
| 5-oxoprolinase subunit pxpb | ATU_RS20005 | Not Available | Positive | 1400191 - 1400898 | 25667.9 |
| biotin-dependent carboxyltransferase family protein | ATU_RS20010 | Not Available | Positive | 1400895 - 1401890 | 35291.6 |
| 5-oxoprolinase subunit pxpa | ATU_RS20015 | Not Available | Positive | 1401921 - 1402688 | 27242.1 |
| pyridoxal phosphate-dependent aminotransferase | ATU_RS20020 | Not Available | Positive | 1402734 - 1403939 | 43323.0 |
| nitrogen assimilation transcriptional regulator nac | ATU_RS20025 | Not Available | Negative | 1403998 - 1404903 | 32717.1 |
| sdr family oxidoreductase | ATU_RS20030 | Not Available | Positive | 1405144 - 1405923 | 27841.4 |
| amino acid abc transporter permease | ATU_RS20035 | Not Available | Positive | 1405920 - 1406627 | 25954.1 |
| amino acid abc transporter permease | ATU_RS20040 | Not Available | Positive | 1406624 - 1407382 | 27546.6 |
Pathways
396 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |

