Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | A5CPYCFAH4_09270 | P69935 | Positive | 1064820 - 1065566 | 26792.0 |
| membrane protein | A5CPYCFAH4_09280 | O05248 | Positive | 1065573 - 1066340 | 27420.4 |
| hypothetical protein | A5CPYCFAH4_09290 | Not Available | Positive | 1066348 - 1067955 | 58840.7 |
| alginate o-acetyltransferase | A5CPYCFAH4_09300 | Q51392 | Positive | 1067952 - 1069457 | 56863.7 |
| phosphatase pap2 family protein | A5CPYCFAH4_09310 | Q8A6M3 | Positive | 1069614 - 1070273 | 24351.4 |
| lysine--trna ligase | A5CPYCFAH4_09320 | Q5L9E5 | Positive | 1070340 - 1072061 | 65852.0 |
| triosephosphate isomerase | A5CPYCFAH4_09330 | Q8A0U2 | Positive | 1072100 - 1072858 | 26733.0 |
| hypothetical protein | A5CPYCFAH4_09340 | B2RLW4 | Negative | 1073258 - 1073863 | 21873.8 |
| dna-directed rna polymerase subunit alpha | A5CPYCFAH4_09350 | A6KYH0 | Negative | 1073866 - 1074858 | 36992.8 |
| 30s ribosomal protein s4 | A5CPYCFAH4_09360 | A6LEG6 | Negative | 1074882 - 1075490 | 22597.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
