Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_08490 | T2KPJ3 | Negative | 972290 - 975499 | 118105.0 |
| hypothetical protein | A5CPYCFAH4_08500 | Not Available | Negative | 975667 - 977598 | 70864.6 |
| hypothetical protein | A5CPYCFAH4_08510 | Not Available | Negative | 977660 - 979792 | 77672.9 |
| copper homeostasis protein cutc | A5CPYCFAH4_08520 | Q89ZG1 | Negative | 980490 - 981221 | 26003.2 |
| transglutaminase | A5CPYCFAH4_08530 | Not Available | Negative | 981231 - 983852 | 96878.5 |
| alpha-l-fucosidase | A5CPYCFAH4_08540 | P10901 | Negative | 983849 - 985096 | 47242.7 |
| hypothetical protein | A5CPYCFAH4_08550 | Q64R94 | Positive | 985566 - 986021 | 16250.7 |
| transposase | A5CPYCFAH4_08560 | P16940 | Negative | 986065 - 986955 | 34819.1 |
| hypothetical protein | A5CPYCFAH4_08570 | Not Available | Negative | 986952 - 987365 | 15663.7 |
| hypothetical protein | A5CPYCFAH4_08580 | Not Available | Positive | 987641 - 988147 | 18915.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
