Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | A5CPYCFAH4_07670 | Q9K1H0 | Negative | 865148 - 867520 | 90621.5 |
| nadph-dependent oxidoreductase | A5CPYCFAH4_07680 | Q6GJR6 | Negative | 867561 - 868307 | 27954.4 |
| diaminopimelate epimerase | A5CPYCFAH4_07690 | A6GYX5 | Positive | 868444 - 869250 | 29093.3 |
| hypothetical protein | A5CPYCFAH4_07700 | Not Available | Positive | 869270 - 869473 | 7901.02 |
| alpha/beta hydrolase | A5CPYCFAH4_07710 | A0KF11 | Positive | 869484 - 870281 | 29027.2 |
| hypothetical protein | A5CPYCFAH4_07720 | Not Available | Positive | 870412 - 872139 | 67567.9 |
| transcriptional regulator | A5CPYCFAH4_07730 | Not Available | Positive | 872286 - 872567 | 10762.6 |
| peptidase | A5CPYCFAH4_07740 | P25894 | Positive | 872685 - 873494 | 28898.4 |
| formamidopyrimidine-dna glycosylase | A5CPYCFAH4_07750 | Q817G5 | Negative | 873703 - 874530 | 29735.6 |
| hypothetical protein | A5CPYCFAH4_07760 | Not Available | Negative | 874968 - 875177 | 7626.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
