Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease y | A5CPYCFAH4_06970 | A6LD62 | Positive | 793534 - 795081 | 57770.9 |
| transcriptional regulator | A5CPYCFAH4_06980 | P31449 | Negative | 795312 - 796232 | 35033.6 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_06990 | T2KM18 | Positive | 796949 - 800083 | 116225.0 |
| membrane protein | A5CPYCFAH4_07000 | T2KN63 | Positive | 800106 - 801767 | 63056.6 |
| hypothetical protein | A5CPYCFAH4_07010 | Not Available | Positive | 801813 - 802970 | 42475.7 |
| hypothetical protein | A5CPYCFAH4_07020 | Not Available | Positive | 803168 - 804409 | 46883.9 |
| hypothetical protein | A5CPYCFAH4_07030 | Not Available | Positive | 804431 - 806344 | 72016.7 |
| phosphohydrolase | A5CPYCFAH4_07040 | Not Available | Positive | 806474 - 807103 | 24053.4 |
| diguanylate cyclase | A5CPYCFAH4_07050 | Q0W8E1 | Negative | 807304 - 808275 | 34930.6 |
| aminomethyltransferase | A5CPYCFAH4_07060 | Q5LFT6 | Negative | 808347 - 809447 | 39970.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
