Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | A5CPYCFAH4_06340 | P11045 | Negative | 721137 - 721622 | 18186.6 |
| thymidylate synthase | A5CPYCFAH4_06350 | A7HVX4 | Negative | 721702 - 722601 | 34203.0 |
| udp-2,3-diacylglucosamine hydrolase | A5CPYCFAH4_06360 | Q7VKH0 | Negative | 722598 - 723335 | 28409.8 |
| hypothetical protein | A5CPYCFAH4_06370 | Q63DQ8 | Negative | 723335 - 724477 | 42526.6 |
| hypothetical protein | A5CPYCFAH4_06380 | Not Available | Negative | 724540 - 725226 | 27200.3 |
| sigma-54-dependent fis family transcriptional regulator | A5CPYCFAH4_06390 | P25852 | Positive | 725456 - 726553 | 40676.7 |
| hypothetical protein | A5CPYCFAH4_06400 | Not Available | Negative | 726561 - 727079 | 18830.9 |
| hypothetical protein | A5CPYCFAH4_06410 | Not Available | Negative | 727097 - 727807 | 25560.1 |
| tetr family transcriptional regulator | A5CPYCFAH4_06420 | Not Available | Negative | 727898 - 728503 | 22877.9 |
| phosphoglycolate phosphatase | A5CPYCFAH4_06430 | O67359 | Negative | 728639 - 729301 | 24158.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
