Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | A5CPYCFAH4_05860 | Q51872 | Negative | 669835 - 670728 | 34256.1 |
| alcohol dehydrogenase | A5CPYCFAH4_05870 | Q59477 | Positive | 670969 - 672144 | 42464.0 |
| membrane protein | A5CPYCFAH4_05880 | Q01609 | Positive | 672165 - 673193 | 37635.8 |
| hypothetical protein | A5CPYCFAH4_05890 | Not Available | Positive | 673299 - 673847 | 19275.9 |
| hypothetical protein | A5CPYCFAH4_05900 | Not Available | Positive | 673971 - 674831 | 32544.5 |
| tspo and mbr | A5CPYCFAH4_05910 | O28797 | Positive | 674908 - 675384 | 17589.1 |
| arginase | A5CPYCFAH4_05920 | C4LSS0 | Negative | 675479 - 676357 | 31570.2 |
| hypothetical protein | A5CPYCFAH4_05930 | Not Available | Positive | 677227 - 679236 | 72104.3 |
| cell surface protein | A5CPYCFAH4_05940 | Not Available | Positive | 679248 - 680972 | 63559.6 |
| lipoprotein | A5CPYCFAH4_05950 | Not Available | Positive | 680977 - 683004 | 72308.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
