Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase susg | A5CPYCFAH4_04360 | Q8A1G3 | Positive | 496885 - 499203 | 84512.0 |
| alpha-amylase | A5CPYCFAH4_04370 | L8B068 | Positive | 499214 - 500551 | 50346.4 |
| neopullulanase susa | A5CPYCFAH4_04380 | Q8A1G0 | Positive | 500749 - 502626 | 70485.7 |
| alpha-glucosidase | A5CPYCFAH4_04390 | G8JZS4 | Positive | 502639 - 504834 | 82834.6 |
| merr family transcriptional regulator | A5CPYCFAH4_04400 | Not Available | Positive | 505373 - 505657 | 10750.2 |
| dna-binding protein | A5CPYCFAH4_04410 | Not Available | Positive | 505659 - 505955 | 11478.9 |
| transposase | A5CPYCFAH4_04420 | Q57066 | Positive | 506028 - 506540 | 19979.6 |
| hypothetical protein | A5CPYCFAH4_04430 | P19769 | Positive | 506582 - 507007 | 17003.8 |
| hypothetical protein | A5CPYCFAH4_04440 | P55635 | Negative | 506949 - 508151 | 47093.5 |
| hypothetical protein | A5CPYCFAH4_04450 | P55459 | Negative | 508151 - 509116 | 36423.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
