Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | A5CPYCFAH4_04260 | P96613 | Positive | 481433 - 482677 | 45058.7 |
| alpha/beta hydrolase | A5CPYCFAH4_04270 | Not Available | Positive | 482815 - 483744 | 33096.0 |
| 4-alpha-glucanotransferase | A5CPYCFAH4_04280 | Q69Q02 | Positive | 483827 - 486427 | 100344.0 |
| dna-binding response regulator | A5CPYCFAH4_04290 | Q8D4U6 | Negative | 486516 - 487268 | 28588.3 |
| hypothetical protein | A5CPYCFAH4_04300 | Q81JL2 | Negative | 487270 - 488652 | 51389.7 |
| hypothetical protein | A5CPYCFAH4_04310 | Q03411 | Positive | 488842 - 489738 | 32657.0 |
| hypothetical protein | A5CPYCFAH4_04320 | Not Available | Positive | 489745 - 490182 | 15266.5 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_04330 | Q8A1G1 | Positive | 490244 - 493267 | 110943.0 |
| membrane protein | A5CPYCFAH4_04340 | Q8A1G2 | Positive | 493281 - 494939 | 61081.2 |
| hypothetical protein | A5CPYCFAH4_04350 | Not Available | Positive | 494963 - 496777 | 64777.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
