Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | A5CPYCFAH4_03660 | Q46127 | Positive | 402131 - 403255 | 42509.9 |
| chloride channel protein | A5CPYCFAH4_03670 | Q8XTT4 | Positive | 403257 - 405038 | 66046.7 |
| hypothetical protein | A5CPYCFAH4_03680 | Not Available | Positive | 405137 - 405481 | 12787.3 |
| hypothetical protein | A5CPYCFAH4_03690 | Not Available | Positive | 405506 - 405697 | 6799.14 |
| hypothetical protein | A5CPYCFAH4_03700 | Not Available | Positive | 405838 - 406302 | 17357.9 |
| transcriptional regulator | A5CPYCFAH4_03710 | C0H3X9 | Positive | 406292 - 406492 | 7411.05 |
| d- | A5CPYCFAH4_03720 | P45313 | Negative | 406626 - 407591 | 34333.9 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | A5CPYCFAH4_03730 | Q31KV0 | Negative | 407591 - 408337 | 27104.7 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | A5CPYCFAH4_03740 | A6L5J0 | Negative | 408343 - 409107 | 28254.7 |
| lon protease | A5CPYCFAH4_03750 | A5FG89 | Negative | 409188 - 411620 | 89961.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
