Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | A5CPYCFAH4_03560 | A6L8I7 | Positive | 389742 - 390101 | 13187.0 |
| membrane protein | A5CPYCFAH4_03570 | P54486 | Positive | 390221 - 390733 | 17834.2 |
| zinc protease | A5CPYCFAH4_03580 | P55679 | Positive | 390784 - 393651 | 107731.0 |
| adenosylhomocysteinase | A5CPYCFAH4_03590 | B3QMF5 | Negative | 393950 - 395731 | 65524.4 |
| ai-2e family transporter | A5CPYCFAH4_03600 | O32095 | Negative | 395731 - 396837 | 40168.6 |
| phosphatidylserine decarboxylase | A5CPYCFAH4_03610 | B3ESH0 | Negative | 396853 - 397524 | 25521.6 |
| phosphatidate cytidylyltransferase | A5CPYCFAH4_03620 | P73548 | Negative | 397546 - 398382 | 29858.5 |
| atp-dependent zinc metalloprotease ftsh | A5CPYCFAH4_03630 | A6LD25 | Negative | 398394 - 400526 | 78807.6 |
| ribosomal silencing factor rsfs | A5CPYCFAH4_03640 | Q9KD89 | Negative | 400535 - 400885 | 13046.6 |
| transcriptional regulator | A5CPYCFAH4_03650 | Q9X725 | Negative | 401119 - 402018 | 33393.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
