Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m24 | A5CPYCFAH4_03460 | P0AFT0 | Positive | 378118 - 379413 | 47683.8 |
| upf0306 protein yhbp | A5CPYCFAH4_03470 | Q5PL88 | Positive | 379710 - 380078 | 13604.5 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | A5CPYCFAH4_03480 | Q8A0U8 | Positive | 380063 - 380773 | 25430.3 |
| hypothetical protein | A5CPYCFAH4_03490 | Not Available | Positive | 380757 - 381296 | 21301.7 |
| rubredoxin | A5CPYCFAH4_03500 | P00268 | Positive | 381436 - 381600 | 5998.04 |
| beta-xylosidase | A5CPYCFAH4_03510 | A9ZND1 | Positive | 381788 - 383326 | 57092.4 |
| dipeptidyl-peptidase iii | A5CPYCFAH4_03520 | O55096 | Negative | 383457 - 385445 | 75285.1 |
| hypothetical protein | A5CPYCFAH4_03530 | E8MGH8 | Positive | 385731 - 387794 | 75686.5 |
| hypothetical protein | A5CPYCFAH4_03540 | Not Available | Negative | 387892 - 388551 | 23867.8 |
| pantothenate synthetase | A5CPYCFAH4_03550 | Q89ZR8 | Positive | 388906 - 389742 | 30840.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
