Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_03260 | Not Available | Negative | 356536 - 356901 | 13908.0 |
| tyrosine recombinase | A5CPYCFAH4_03270 | Q8TZV9 | Negative | 356930 - 358219 | 50465.9 |
| tyrosine recombinase | A5CPYCFAH4_03280 | P46352 | Negative | 358251 - 359474 | 46018.4 |
| ribose 5-phosphate isomerase b | A5CPYCFAH4_03290 | P37351 | Positive | 359906 - 360367 | 16625.8 |
| hypothetical protein | A5CPYCFAH4_03300 | Not Available | Positive | 360579 - 361670 | 40718.3 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | A5CPYCFAH4_03310 | Q8AA41 | Negative | 361835 - 362647 | 28999.2 |
| hypothetical protein | A5CPYCFAH4_03320 | Not Available | Positive | 362681 - 363646 | 35467.3 |
| hypothetical protein | A5CPYCFAH4_03330 | Q47910 | Positive | 363672 - 365237 | 58067.8 |
| fe-s metabolism protein sufe | A5CPYCFAH4_03340 | P74523 | Positive | 365256 - 365675 | 15611.7 |
| fe-s assembly suf system protein | A5CPYCFAH4_03350 | P70949 | Positive | 365685 - 366005 | 11977.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
