Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_27760 | Not Available | Negative | 3295307 - 3295495 | 7192.04 |
| trna pseudouridine synthase a | A5CPYCFAH4_27770 | Q5LGZ6 | Negative | 3295521 - 3296285 | 28794.2 |
| aspartate ammonia-lyase | A5CPYCFAH4_27780 | P07346 | Negative | 3296326 - 3297756 | 52117.1 |
| 4-hydroxy-tetrahydrodipicolinate reductase | A5CPYCFAH4_27790 | A0LZI4 | Positive | 3298122 - 3298877 | 27030.6 |
| signal peptidase i | A5CPYCFAH4_27800 | P44454 | Positive | 3298892 - 3300244 | 52579.1 |
| hypothetical protein | A5CPYCFAH4_27810 | P32437 | Positive | 3300248 - 3300853 | 22075.4 |
| uvrabc system protein a | A5CPYCFAH4_27820 | Q9WYV0 | Positive | 3300854 - 3303643 | 102782.0 |
| peptidase m16 | A5CPYCFAH4_27830 | Q04805 | Positive | 3303691 - 3304905 | 44661.9 |
| glutamine amidotransferase | A5CPYCFAH4_27840 | P96658 | Positive | 3304913 - 3305509 | 20962.1 |
| o-methyltransferase | A5CPYCFAH4_27850 | Q00719 | Positive | 3305509 - 3306156 | 24248.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
