Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_26690 | Q8N661 | Negative | 3163358 - 3163987 | 22279.1 |
| phenylalanine--trna ligase beta subunit | A5CPYCFAH4_26700 | Q64T65 | Negative | 3164092 - 3166557 | 90958.9 |
| tryptophan synthase beta chain | A5CPYCFAH4_26710 | O29028 | Positive | 3167129 - 3168490 | 49446.3 |
| permease | A5CPYCFAH4_26720 | P0ABT9 | Negative | 3168639 - 3169538 | 33011.4 |
| diaminopimelate decarboxylase | A5CPYCFAH4_26730 | Q8A800 | Negative | 3169722 - 3170882 | 43111.4 |
| 4-hydroxybenzoate octaprenyltransferase | A5CPYCFAH4_26740 | Q5QUP3 | Negative | 3170931 - 3171815 | 31709.5 |
| elongation factor 4 | A5CPYCFAH4_26750 | A6L744 | Positive | 3171946 - 3173736 | 66479.2 |
| amp-dependent synthetase | A5CPYCFAH4_26760 | B2HGV4 | Positive | 3173750 - 3175657 | 71031.5 |
| Trna-gly | Not Available | Not Available | Positive | 3175723 - 3175795 | Not Available |
| hypothetical protein | A5CPYCFAH4_26770 | Not Available | Negative | 3175975 - 3176529 | 19573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
