Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | A5CPYCFAH4_26290 | O68045 | Positive | 3118184 - 3118951 | 29291.0 |
| hypothetical protein | A5CPYCFAH4_26300 | P44493 | Positive | 3118954 - 3120792 | 68149.6 |
| redox-sensing transcriptional repressor rex | A5CPYCFAH4_26310 | Q03VB1 | Positive | 3120803 - 3121459 | 23880.1 |
| hypothetical protein | A5CPYCFAH4_26320 | Q8Y7F2 | Positive | 3121456 - 3122298 | 30307.4 |
| thioesterase | A5CPYCFAH4_26330 | Q45061 | Positive | 3122304 - 3122717 | 16517.0 |
| hypothetical protein | A5CPYCFAH4_26340 | Not Available | Positive | 3122737 - 3123069 | 12073.6 |
| hypothetical protein | A5CPYCFAH4_26350 | Not Available | Negative | 3123062 - 3123286 | 7688.42 |
| thiol:disulfide interchange protein | A5CPYCFAH4_26360 | Not Available | Negative | 3123392 - 3125275 | 69654.3 |
| chaperone protein htpg | A5CPYCFAH4_26370 | P0CJ84 | Negative | 3125417 - 3127477 | 78998.1 |
| nitroreductase | A5CPYCFAH4_26380 | O30013 | Positive | 3127655 - 3128173 | 19074.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
