Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate-protein phosphotransferase | A5CPYCFAH4_25990 | O83018 | Positive | 3069884 - 3071485 | 56415.8 |
| hypothetical protein | A5CPYCFAH4_26000 | D5EV35 | Positive | 3071533 - 3072369 | 30245.8 |
| anti-sigma factor | A5CPYCFAH4_26010 | Not Available | Negative | 3072515 - 3073495 | 36864.5 |
| dna-directed rna polymerase sigma-70 factor | A5CPYCFAH4_26020 | P44790 | Negative | 3073536 - 3074147 | 23508.0 |
| hypothetical protein | A5CPYCFAH4_26030 | Not Available | Negative | 3074339 - 3074668 | 12048.3 |
| hypothetical protein | A5CPYCFAH4_26040 | Not Available | Negative | 3074692 - 3077859 | 110840.0 |
| hypothetical protein | A5CPYCFAH4_26050 | Not Available | Negative | 3077875 - 3079257 | 49135.9 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_26060 | T2KPJ3 | Positive | 3079855 - 3083454 | 133084.0 |
| hypothetical protein | A5CPYCFAH4_26070 | T2KNB8 | Positive | 3083467 - 3085299 | 70098.3 |
| serine/threonine protein phosphatase | A5CPYCFAH4_26080 | Not Available | Positive | 3085349 - 3086908 | 57330.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
