Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | A5CPYCFAH4_25790 | P0AD19 | Negative | 3048157 - 3048855 | 24362.7 |
| lrga family protein | A5CPYCFAH4_25800 | A8GC34 | Negative | 3048848 - 3049240 | 14438.1 |
| ferrous iron transport protein b | A5CPYCFAH4_25810 | Q7MV19 | Negative | 3049467 - 3052100 | 96433.7 |
| outer membrane protein oprm | A5CPYCFAH4_25820 | Q849R1 | Negative | 3052183 - 3053547 | 49886.6 |
| multidrug efflux rnd transporter permease subunit | A5CPYCFAH4_25830 | Q8G2M6 | Negative | 3053544 - 3056681 | 112198.0 |
| mexx family efflux pump subunit | A5CPYCFAH4_25840 | Q849Q9 | Negative | 3056686 - 3057795 | 40049.2 |
| histone h1 | A5CPYCFAH4_25850 | Not Available | Positive | 3057970 - 3058143 | 6210.59 |
| membrane protein | A5CPYCFAH4_25860 | P37661 | Negative | 3058251 - 3059963 | 65351.2 |
| membrane protein | A5CPYCFAH4_25870 | Not Available | Negative | 3059976 - 3061196 | 46359.9 |
| hypothetical protein | A5CPYCFAH4_25880 | Not Available | Negative | 3061201 - 3061719 | 19353.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
