Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit b | A5CPYCFAH4_25700 | P05652 | Negative | 3033043 - 3035001 | 73070.6 |
| phosphonate abc transporter atp-binding protein | A5CPYCFAH4_25710 | O34814 | Negative | 3035185 - 3035922 | 27612.7 |
| sensor histidine kinase | A5CPYCFAH4_25720 | Q9P896 | Positive | 3036174 - 3039359 | 120667.0 |
| Tmrna,resume consensus sequence (at 142): cttaatcgccgggcccaa | Not Available | Not Available | Positive | 3039623 - 3040023 | Not Available |
| serine/threonine protein kinase | A5CPYCFAH4_25730 | C9RR52 | Negative | 3040241 - 3042160 | 69700.8 |
| phosphoribosylglycinamide formyltransferase 2 | A5CPYCFAH4_25740 | A6L404 | Positive | 3042245 - 3043423 | 42478.1 |
| peptidyl-prolyl cis-trans isomerase | A5CPYCFAH4_25750 | P35137 | Positive | 3043438 - 3043878 | 15950.9 |
| acetyltransferase | A5CPYCFAH4_25760 | O74311 | Negative | 3043945 - 3044796 | 31394.4 |
| aminotransferase | A5CPYCFAH4_25770 | Q3ZXC8 | Negative | 3044993 - 3046180 | 44397.4 |
| putative transporter | A5CPYCFAH4_25780 | Q64TC3 | Negative | 3046365 - 3048029 | 59461.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
