Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 3023450 - 3023526 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3024020 - 3024096 | Not Available |
| methyltransferase | A5CPYCFAH4_25620 | Q89B29 | Negative | 3024152 - 3024688 | 20157.1 |
| hypothetical protein | A5CPYCFAH4_25630 | Not Available | Negative | 3024679 - 3025245 | 20376.6 |
| hypothetical protein | A5CPYCFAH4_25640 | Not Available | Negative | 3025268 - 3025903 | 24171.3 |
| atp-dependent endonuclease | A5CPYCFAH4_25650 | Q9RT63 | Positive | 3026042 - 3027373 | 50338.7 |
| dna glycosylase | A5CPYCFAH4_25660 | Not Available | Positive | 3027366 - 3027941 | 21899.6 |
| dna mismatch repair protein muts | A5CPYCFAH4_25670 | A6KZM1 | Positive | 3028052 - 3030730 | 100284.0 |
| hypothetical protein | A5CPYCFAH4_25680 | Not Available | Positive | 3030727 - 3031950 | 44401.5 |
| uridine kinase | A5CPYCFAH4_25690 | B7GIU0 | Negative | 3032345 - 3032968 | 23450.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
