Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_25430 | Not Available | Negative | 2999683 - 3000756 | 41299.8 |
| Trna-lys | Not Available | Not Available | Positive | 3000883 - 3000955 | Not Available |
| saccharopine dehydrogenase | A5CPYCFAH4_25440 | P0DPE4 | Positive | 3001087 - 3002277 | 44315.5 |
| hypothetical protein | A5CPYCFAH4_25450 | Q9S3R8 | Positive | 3002536 - 3003564 | 36974.6 |
| carboxynorspermidine decarboxylase | A5CPYCFAH4_25460 | A8FNH9 | Positive | 3003978 - 3005108 | 42184.6 |
| cysteate synthase | A5CPYCFAH4_25470 | Q8Q0K3 | Positive | 3005128 - 3006420 | 47039.2 |
| hypothetical protein | A5CPYCFAH4_25480 | A8A774 | Positive | 3006723 - 3008705 | 72992.8 |
| hypothetical protein | A5CPYCFAH4_25490 | Q91XD4 | Positive | 3009228 - 3010925 | 60454.4 |
| urocanate hydratase | A5CPYCFAH4_25500 | Q86AX3 | Positive | 3010931 - 3012952 | 75055.1 |
| histidine ammonia-lyase | A5CPYCFAH4_25510 | Q67JH4 | Positive | 3012969 - 3014450 | 54424.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
