Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/iodide co-transporter | A5CPYCFAH4_25030 | Q63008 | Positive | 2947500 - 2948951 | 53336.3 |
| xanthan lyase | A5CPYCFAH4_25040 | Not Available | Positive | 2948941 - 2951934 | 111105.0 |
| aspartyl-trna amidotransferase subunit b | A5CPYCFAH4_25050 | P54464 | Positive | 2952062 - 2952511 | 16034.6 |
| hypothetical protein | A5CPYCFAH4_25060 | Not Available | Positive | 2952525 - 2953679 | 42447.4 |
| transporter | A5CPYCFAH4_25070 | Not Available | Positive | 2953679 - 2954596 | 33328.1 |
| hypothetical protein | A5CPYCFAH4_25080 | Not Available | Positive | 2954775 - 2955224 | 17124.6 |
| hypothetical protein | A5CPYCFAH4_25090 | Not Available | Positive | 2955258 - 2955830 | 21654.2 |
| tyrosine recombinase | A5CPYCFAH4_25100 | Not Available | Positive | 2956260 - 2957153 | 34693.9 |
| hypothetical protein | A5CPYCFAH4_25110 | Not Available | Positive | 2958263 - 2959180 | 33755.9 |
| cell surface protein | A5CPYCFAH4_25120 | Q8YA32 | Positive | 2959281 - 2961026 | 64883.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
