Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | A5CPYCFAH4_23660 | P0AAC5 | Negative | 2792847 - 2793560 | 26097.6 |
| hypothetical protein | A5CPYCFAH4_23670 | Not Available | Negative | 2793696 - 2794853 | 41443.6 |
| hypothetical protein | A5CPYCFAH4_23680 | Not Available | Negative | 2794904 - 2795986 | 39603.9 |
| is4 family transposase | A5CPYCFAH4_23690 | P55729 | Negative | 2796151 - 2797314 | 45921.5 |
| tonb-dependent receptor | A5CPYCFAH4_23700 | Not Available | Negative | 2798143 - 2800509 | 88961.2 |
| hypothetical protein | A5CPYCFAH4_23710 | Q8GXU8 | Positive | 2801198 - 2801926 | 27684.2 |
| dna topoisomerase (atp-hydrolyzing) | A5CPYCFAH4_23720 | Q59189 | Positive | 2801930 - 2803804 | 70418.7 |
| dna topoisomerase iv subunit a | A5CPYCFAH4_23730 | O51066 | Positive | 2803810 - 2806611 | 105009.0 |
| shikimate kinase | A5CPYCFAH4_23740 | Q8A2B2 | Positive | 2806622 - 2807146 | 19267.2 |
| glutamate racemase | A5CPYCFAH4_23750 | A5UTG1 | Positive | 2807236 - 2808042 | 29011.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
