Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc metalloprotease | A5CPYCFAH4_23560 | O67776 | Negative | 2781312 - 2782628 | 49929.9 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | A5CPYCFAH4_23570 | Q5L9P6 | Negative | 2782642 - 2783793 | 41451.0 |
| hypothetical protein | A5CPYCFAH4_23580 | P44864 | Negative | 2783803 - 2784672 | 32524.2 |
| nucleotidyltransferase | A5CPYCFAH4_23590 | Not Available | Positive | 2784790 - 2785701 | 33731.2 |
| hypothetical protein | A5CPYCFAH4_23600 | Not Available | Negative | 2785839 - 2786228 | 14610.5 |
| chromosome partitioning protein para | A5CPYCFAH4_23610 | O52788 | Negative | 2786229 - 2788691 | 92488.2 |
| polysaccharide export outer membrane protein | A5CPYCFAH4_23620 | Q48450 | Negative | 2788700 - 2789494 | 28915.8 |
| alpha-amylase | A5CPYCFAH4_23630 | L8B068 | Positive | 2789697 - 2790974 | 48264.2 |
| hypothetical protein | A5CPYCFAH4_23640 | P55140 | Positive | 2791150 - 2792061 | 32325.1 |
| hypothetical protein | A5CPYCFAH4_23650 | A8AVK0 | Positive | 2792197 - 2792772 | 21359.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
