Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | A5CPYCFAH4_22670 | P0AGF5 | Positive | 2677296 - 2678615 | 48620.6 |
| alpha-l-arabinofuranosidase | A5CPYCFAH4_22680 | Q8VZR2 | Positive | 2678628 - 2681063 | 88878.6 |
| intracellular exo-alpha-(1->5)-l-arabinofuranosidase 1 | A5CPYCFAH4_22690 | Q9XBQ3 | Positive | 2681101 - 2682624 | 57712.1 |
| aldose 1-epimerase | A5CPYCFAH4_22700 | Q66HG4 | Positive | 2682686 - 2683813 | 41293.7 |
| putative transaldolase | A5CPYCFAH4_22710 | B2RHK7 | Negative | 2683897 - 2684553 | 23632.7 |
| hypothetical protein | A5CPYCFAH4_22720 | Not Available | Negative | 2685111 - 2688554 | 127610.0 |
| hypothetical protein | A5CPYCFAH4_22730 | P26831 | Negative | 2688570 - 2689496 | 34252.4 |
| membrane protein | A5CPYCFAH4_22740 | T2KNB8 | Negative | 2689520 - 2691163 | 63855.9 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_22750 | T2KPJ3 | Negative | 2691187 - 2693916 | 103089.0 |
| hypothetical protein | A5CPYCFAH4_22760 | Not Available | Positive | 2694581 - 2694838 | 9063.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
