Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 2652352 - 2653872 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2654060 - 2656924 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2657109 - 2657217 | Not Available |
| hypothetical protein | A5CPYCFAH4_22500 | Not Available | Negative | 2657645 - 2658016 | 14069.6 |
| alkaline phosphatase family protein | A5CPYCFAH4_22510 | Q0VA77 | Negative | 2658381 - 2659610 | 47177.3 |
| 4-hydroxybutyrate coa-transferase | A5CPYCFAH4_22520 | P38942 | Negative | 2659685 - 2661004 | 47326.7 |
| hypothetical protein | A5CPYCFAH4_22530 | Not Available | Negative | 2661007 - 2661663 | 24271.3 |
| hypothetical protein | A5CPYCFAH4_22540 | A6LHS1 | Negative | 2661671 - 2664598 | 104569.0 |
| transcription termination/antitermination protein nusa | A5CPYCFAH4_22550 | P48514 | Negative | 2664626 - 2665858 | 46470.4 |
| hypothetical protein | A5CPYCFAH4_22560 | A6LHR9 | Negative | 2665943 - 2666410 | 17197.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
