Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_21500 | Q10449 | Negative | 2543770 - 2544222 | 17137.2 |
| dna-directed rna polymerase sigma-70 factor | A5CPYCFAH4_21510 | O07627 | Negative | 2544367 - 2544942 | 22728.9 |
| anti-sigma factor | A5CPYCFAH4_21520 | Not Available | Positive | 2545125 - 2546090 | 36109.5 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_21530 | T2KPJ3 | Positive | 2546266 - 2549595 | 123420.0 |
| hypothetical protein | A5CPYCFAH4_21540 | Not Available | Positive | 2549608 - 2551200 | 59478.7 |
| hypothetical protein | A5CPYCFAH4_21550 | Not Available | Positive | 2551227 - 2552123 | 32884.7 |
| hypothetical protein | A5CPYCFAH4_21560 | Not Available | Positive | 2552123 - 2553496 | 50772.1 |
| hypothetical protein | A5CPYCFAH4_21570 | P04067 | Positive | 2553499 - 2555118 | 60310.9 |
| endo-beta-n-acetylglucosaminidase | A5CPYCFAH4_21580 | P04067 | Positive | 2555302 - 2556219 | 33245.8 |
| hypothetical protein | A5CPYCFAH4_21590 | Not Available | Positive | 2557037 - 2557387 | 13442.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
