Alistipes onderdonkii subsp. vulgaris

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes onderdonkii subsp. vulgaris is a Gram-negative, anaerobic bacterium known for its flagellar presence, which facilitates motility in anaerobic environments. This subspecies is characterized by having two replicons, indicating a complex genomic structure that may contribute to its adaptability in various ecological niches. The anaerobic nature of Alistipes onderdonkii subsp. vulgaris suggests it thrives in environments devoid of oxygen, such as the human gut, where it may play a role in the microbiome. Its ability to move using flagella could enhance its colonization potential and interaction with other microbial species in such habitats. This bacterium is cataloged under accession numbers AP019737.1 and AP019738.1, which are useful for researchers seeking to study its genetic makeup and functionality further. Understanding the traits and ecological role of Alistipes onderdonkii subsp. vulgaris may provide insights into its contributions to gut health and the overall microbiome, particularly in anaerobic conditions. Its presence in the gut microbiome could be linked to various health outcomes, highlighting the importance of anaerobic microorganisms in human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes onderdonkii
Strainsubsp. vulgaris

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes onderdonkii subsp. vulgaris , Complete Genome

Gene Summary

Adenine Count

696267 bp

Thymine Count

695912 bp

Guanine Count

958181 bp

Cytosine Count

962313 bp

Genome Length

3312673 bp

Protein-coding Genes

2791 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA5CPYCFAH4_20510Q5LIS2Positive2458022 - 245872026424.2
hypothetical proteinA5CPYCFAH4_20520A5FMW5Positive2458868 - 245950022542.3
hypothetical proteinA5CPYCFAH4_20530Not AvailableNegative2459503 - 24597157670.9
glycine--trna ligaseA5CPYCFAH4_20540Q8KAB1Positive2459916 - 246146059794.0
hypothetical proteinA5CPYCFAH4_20550Not AvailablePositive2461471 - 24616326043.41
putative pre-16s rrna nucleaseA5CPYCFAH4_20560Q7MT06Positive2461636 - 246204915392.7
peptide deformylaseA5CPYCFAH4_20570B2RMJ1Positive2462046 - 246259120904.2
hypothetical proteinA5CPYCFAH4_20580Not AvailableNegative2462885 - 246341519859.1
hypothetical proteinA5CPYCFAH4_20590Not AvailableNegative2463718 - 246420617414.0
pyruvate, phosphate dikinaseA5CPYCFAH4_20600P22983Negative2464395 - 2467124100123.0

Displaying genes 2091 – 2100 of 5695 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.