Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_20210 | Not Available | Positive | 2422612 - 2423970 | 50530.4 |
| hypothetical protein | A5CPYCFAH4_20220 | Q5XHI4 | Positive | 2424082 - 2425350 | 47139.4 |
| hypothetical protein | A5CPYCFAH4_20230 | Not Available | Positive | 2425350 - 2426384 | 38804.8 |
| hypothetical protein | A5CPYCFAH4_20240 | Not Available | Positive | 2426457 - 2428463 | 72883.9 |
| retaining alpha-galactosidase | A5CPYCFAH4_20250 | Q8A6L0 | Positive | 2428479 - 2430455 | 72714.3 |
| alpha-1,3-galactosidase b | A5CPYCFAH4_20260 | B1KD83 | Positive | 2430480 - 2432222 | 64839.4 |
| 9-o-acetylesterase | A5CPYCFAH4_20270 | P70665 | Positive | 2432232 - 2433701 | 53983.4 |
| hybrid sensor histidine kinase/response regulator | A5CPYCFAH4_20280 | T2KMF4 | Positive | 2434083 - 2438126 | 148470.0 |
| multidrug transporter mate | A5CPYCFAH4_20290 | Q99WP2 | Negative | 2438269 - 2439621 | 48917.9 |
| dna-binding protein | A5CPYCFAH4_20300 | Not Available | Negative | 2439702 - 2440265 | 21444.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
