Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_20120 | Q8GYD9 | Negative | 2407783 - 2409477 | 65380.7 |
| tyrosine recombinase | A5CPYCFAH4_20130 | Q49XU5 | Negative | 2409838 - 2410932 | 42624.2 |
| Trna-phe | Not Available | Not Available | Positive | 2411299 - 2411371 | Not Available |
| 2-nitropropane dioxygenase | A5CPYCFAH4_20140 | Q9I4V0 | Negative | 2411854 - 2412819 | 34384.6 |
| hypothetical protein | A5CPYCFAH4_20150 | Not Available | Positive | 2412967 - 2414007 | 39952.5 |
| hypothetical protein | A5CPYCFAH4_20160 | Not Available | Negative | 2414676 - 2415422 | 26237.8 |
| hypothetical protein | A5CPYCFAH4_20170 | Not Available | Negative | 2415505 - 2415723 | 7879.51 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_20180 | T2KMI3 | Positive | 2415802 - 2418876 | 113864.0 |
| membrane protein | A5CPYCFAH4_20190 | T2KN63 | Positive | 2418914 - 2420740 | 69987.1 |
| hypothetical protein | A5CPYCFAH4_20200 | Not Available | Positive | 2420787 - 2422445 | 61470.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
