Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | A5CPYCFAH4_20020 | Not Available | Negative | 2385590 - 2387215 | 60226.6 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_20030 | T2KPJ3 | Negative | 2387241 - 2390345 | 114129.0 |
| transposase | A5CPYCFAH4_20040 | Q92A53 | Positive | 2390875 - 2392059 | 45928.6 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_20050 | T2KPJ3 | Positive | 2392373 - 2395498 | 115491.0 |
| membrane protein | A5CPYCFAH4_20060 | Not Available | Positive | 2395517 - 2396986 | 54339.5 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_20070 | T2KPJ3 | Positive | 2397593 - 2400712 | 113534.0 |
| hypothetical protein | A5CPYCFAH4_20080 | Not Available | Positive | 2400742 - 2402409 | 61338.8 |
| hypothetical protein | A5CPYCFAH4_20090 | Not Available | Positive | 2402438 - 2404873 | 87922.0 |
| protease | A5CPYCFAH4_20100 | Q45670 | Positive | 2404955 - 2407021 | 71855.2 |
| hypothetical protein | A5CPYCFAH4_20110 | Not Available | Positive | 2407036 - 2407509 | 16742.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
