Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_19920 | Not Available | Positive | 2372615 - 2373058 | 17167.3 |
| dna mismatch repair protein mutl | A5CPYCFAH4_19930 | A6KXH3 | Positive | 2373059 - 2375122 | 73585.0 |
| rhomboid family intramembrane serine protease | A5CPYCFAH4_19940 | P53259 | Positive | 2375161 - 2375766 | 22853.8 |
| endonuclease | A5CPYCFAH4_19950 | Not Available | Positive | 2375771 - 2376925 | 43375.1 |
| beta-d-galactosidase | A5CPYCFAH4_19960 | P37673 | Positive | 2376937 - 2377386 | 17157.4 |
| udp-glucose 6-dehydrogenase | A5CPYCFAH4_19970 | O86422 | Negative | 2377577 - 2378893 | 48425.0 |
| flavodoxin | A5CPYCFAH4_19980 | Q9FDN7 | Negative | 2378918 - 2380105 | 43951.6 |
| hypothetical protein | A5CPYCFAH4_19990 | Not Available | Negative | 2380444 - 2380908 | 17039.0 |
| protease | A5CPYCFAH4_20000 | I3R794 | Negative | 2380937 - 2382907 | 68990.9 |
| hypothetical protein | A5CPYCFAH4_20010 | Not Available | Negative | 2383054 - 2385546 | 90438.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
