Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5CPYCFAH4_19820 | Not Available | Negative | 2358506 - 2358697 | 6390.18 |
| hypothetical protein | A5CPYCFAH4_19830 | Q62MM5 | Negative | 2358953 - 2361709 | 104445.0 |
| n-acetylmuramoyl-l-alanine amidase | A5CPYCFAH4_19840 | P50864 | Positive | 2361993 - 2363189 | 43362.7 |
| hypothetical protein | A5CPYCFAH4_19850 | P64605 | Positive | 2363203 - 2364204 | 36773.9 |
| endonuclease muts2 | A5CPYCFAH4_19860 | A5D0W6 | Positive | 2364225 - 2366720 | 92039.3 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | A5CPYCFAH4_19870 | A9ESU7 | Positive | 2366841 - 2369210 | 86198.9 |
| hypothetical protein | A5CPYCFAH4_19880 | Not Available | Positive | 2369215 - 2369703 | 16609.7 |
| s-adenosylmethionine-dependent methyltransferase | A5CPYCFAH4_19890 | Q9KUD9 | Positive | 2369705 - 2370415 | 26243.9 |
| hypothetical protein | A5CPYCFAH4_19900 | B2RLI9 | Positive | 2370482 - 2371093 | 22059.0 |
| chaperone protein dnaj | A5CPYCFAH4_19910 | B2RLJ0 | Positive | 2371098 - 2372270 | 41382.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
