Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endo-beta-n-acetylglucosaminidase | A5CPYCFAH4_19230 | P04067 | Negative | 2290425 - 2291357 | 33946.8 |
| hypothetical protein | A5CPYCFAH4_19240 | P04067 | Negative | 2291544 - 2293178 | 61280.8 |
| hypothetical protein | A5CPYCFAH4_19250 | Not Available | Negative | 2293181 - 2294554 | 50886.1 |
| hypothetical protein | A5CPYCFAH4_19260 | Not Available | Negative | 2294554 - 2295450 | 32884.7 |
| hypothetical protein | A5CPYCFAH4_19270 | Not Available | Negative | 2295477 - 2297069 | 59478.7 |
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_19280 | T2KPJ3 | Negative | 2297082 - 2300300 | 119147.0 |
| anti-sigma factor | A5CPYCFAH4_19290 | Not Available | Negative | 2300595 - 2301542 | 36018.1 |
| dna-directed rna polymerase sigma-70 factor | A5CPYCFAH4_19300 | Q45585 | Positive | 2301857 - 2302435 | 23195.2 |
| hypothetical protein | A5CPYCFAH4_19310 | Not Available | Positive | 2303458 - 2303649 | 7308.65 |
| hypothetical protein | A5CPYCFAH4_19320 | Not Available | Positive | 2303738 - 2304322 | 22061.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
