Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_01883 | A5CPYCFAH4_18830 | Not Available | Positive | 2242364 - 2242813 | Not Available |
| hypothetical protein | A5CPYCFAH4_18840 | Not Available | Positive | 2242919 - 2243878 | 34186.6 |
| epoxyqueuosine reductase | A5CPYCFAH4_18850 | G0J2F8 | Negative | 2244137 - 2245057 | 33283.9 |
| amp-binding protein | A5CPYCFAH4_18860 | Q7TYX8 | Positive | 2245157 - 2246836 | 62147.4 |
| hypothetical protein | A5CPYCFAH4_18870 | P0A9U6 | Negative | 2246867 - 2247160 | 11130.4 |
| membrane protein | A5CPYCFAH4_18880 | Q9NX78 | Negative | 2247460 - 2250693 | 123215.0 |
| hypothetical protein | A5CPYCFAH4_18890 | P25888 | Negative | 2251003 - 2252610 | 58869.7 |
| cysteine--trna ligase | A5CPYCFAH4_18900 | Q5LIT7 | Positive | 2252793 - 2254268 | 55598.9 |
| mate family efflux transporter | A5CPYCFAH4_18910 | Q4L8N9 | Positive | 2254489 - 2255892 | 51245.5 |
| cytidylate kinase | A5CPYCFAH4_18920 | Q9YDD5 | Positive | 2255892 - 2256545 | 23921.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
