Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | A5CPYCFAH4_18630 | A0A0I9QGZ2 | Positive | 2211053 - 2213086 | 73559.6 |
| hypothetical protein | A5CPYCFAH4_18640 | Not Available | Negative | 2213311 - 2213706 | 15279.8 |
| s-adenosylmethionine synthase | A5CPYCFAH4_18650 | Q7MTQ0 | Positive | 2214097 - 2215401 | 47873.9 |
| serine protease | A5CPYCFAH4_18660 | A6VUA4 | Positive | 2215602 - 2217038 | 51430.3 |
| rna polymerase sigma factor rpod | A5CPYCFAH4_18670 | P52329 | Positive | 2217099 - 2217959 | 32683.0 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | A5CPYCFAH4_18680 | P32166 | Negative | 2218031 - 2218927 | 32037.8 |
| uracil-dna glycosylase | A5CPYCFAH4_18690 | A6L7T5 | Negative | 2218962 - 2219624 | 24600.4 |
| alkaline phosphatase | A5CPYCFAH4_18700 | P19406 | Positive | 2219696 - 2220790 | 38385.8 |
| hypothetical protein | A5CPYCFAH4_18710 | T2KM18 | Negative | 2221024 - 2223597 | 93578.2 |
| transcriptional regulator | A5CPYCFAH4_18720 | P06555 | Negative | 2223628 - 2224002 | 14347.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
