Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | A5CPYCFAH4_18530 | Q8A6L0 | Positive | 2195193 - 2197133 | 72728.5 |
| cyclic dehypoxanthine futalosine synthase | A5CPYCFAH4_18540 | Q9XAP2 | Negative | 2197274 - 2198374 | 41340.9 |
| ribonuclease r | A5CPYCFAH4_18550 | O32231 | Negative | 2198377 - 2200611 | 85124.5 |
| amidohydrolase | A5CPYCFAH4_18560 | O34980 | Negative | 2200608 - 2201720 | 40693.8 |
| methylenetetrahydrofolate reductase | A5CPYCFAH4_18570 | O67422 | Negative | 2201730 - 2202695 | 35774.1 |
| methionine synthase | A5CPYCFAH4_18580 | Q8DCJ7 | Negative | 2202702 - 2206316 | 131258.0 |
| glutaminyl-peptide cyclotransferase | A5CPYCFAH4_18590 | Q84WV9 | Negative | 2206317 - 2207108 | 29004.5 |
| trigger factor | A5CPYCFAH4_18600 | Q2SK37 | Positive | 2207461 - 2208786 | 50662.3 |
| atp-dependent clp protease proteolytic subunit | A5CPYCFAH4_18610 | Q64NW2 | Positive | 2209045 - 2209713 | 24340.3 |
| atp-dependent clp protease atp-binding subunit clpx | A5CPYCFAH4_18620 | Q5L8L7 | Positive | 2209713 - 2210990 | 47269.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
