Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | A5CPYCFAH4_18050 | O31711 | Negative | 2134062 - 2134751 | 25121.4 |
| tonb-dependent receptor | A5CPYCFAH4_18060 | P76115 | Positive | 2135192 - 2138023 | 103657.0 |
| duf4876 domain-containing protein | A5CPYCFAH4_18070 | Not Available | Positive | 2138029 - 2139261 | 45115.8 |
| hypothetical protein | A5CPYCFAH4_18080 | Not Available | Positive | 2139289 - 2140764 | 54902.3 |
| hypothetical protein | A5CPYCFAH4_18090 | Not Available | Positive | 2140781 - 2142385 | 56706.5 |
| hypothetical protein | A5CPYCFAH4_18100 | P52636 | Positive | 2142430 - 2144382 | 72673.9 |
| hypothetical protein | A5CPYCFAH4_18110 | B2RID1 | Positive | 2144443 - 2146614 | 81909.2 |
| 4-hydroxybutyrate coa-transferase | A5CPYCFAH4_18120 | P38942 | Negative | 2146815 - 2148107 | 46176.6 |
| aminotransferase | A5CPYCFAH4_18130 | O58489 | Negative | 2148112 - 2149425 | 48324.9 |
| indolepyruvate oxidoreductase | A5CPYCFAH4_18140 | O28249 | Negative | 2149407 - 2150009 | 21103.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
