Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | A5CPYCFAH4_17250 | T2KPJ3 | Negative | 2046621 - 2049884 | 121595.0 |
| hypothetical protein | A5CPYCFAH4_17260 | Not Available | Negative | 2049910 - 2052315 | 83592.1 |
| hypothetical protein | A5CPYCFAH4_17270 | Not Available | Negative | 2052711 - 2053268 | 21816.2 |
| hypothetical protein | A5CPYCFAH4_17280 | Not Available | Negative | 2053696 - 2053980 | 9549.3 |
| alpha-mannosidase | A5CPYCFAH4_17290 | Q9NTJ4 | Positive | 2054186 - 2057383 | 118180.0 |
| hypothetical protein | A5CPYCFAH4_17300 | Not Available | Negative | 2057549 - 2057824 | 10593.6 |
| collagen-binding protein | A5CPYCFAH4_17310 | Not Available | Positive | 2058360 - 2060750 | 87914.2 |
| glutamate:gamma-aminobutyrate antiporter | A5CPYCFAH4_17320 | P37034 | Negative | 2060923 - 2062386 | 52448.4 |
| hypothetical protein | A5CPYCFAH4_17330 | Not Available | Negative | 2062845 - 2064545 | 59775.3 |
| adenylosuccinate lyase | A5CPYCFAH4_17340 | Q54J34 | Negative | 2065209 - 2066567 | 50644.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
