Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit l | A5CPYCFAH4_17080 | P31971 | Positive | 2024708 - 2026600 | 68901.0 |
| nadh dehydrogenase subunit m | A5CPYCFAH4_17090 | Q92G96 | Positive | 2026613 - 2028097 | 53882.8 |
| nadh-quinone oxidoreductase subunit n | A5CPYCFAH4_17100 | Q64Y15 | Positive | 2028104 - 2029531 | 51630.5 |
| peptidase s9 | A5CPYCFAH4_17110 | B8N970 | Negative | 2029814 - 2031949 | 80925.1 |
| hypothetical protein | A5CPYCFAH4_17120 | Not Available | Negative | 2031963 - 2032649 | 27002.1 |
| n-acetylmuramoyl-l-alanine amidase | A5CPYCFAH4_17130 | O32083 | Negative | 2032662 - 2033669 | 38109.8 |
| hypothetical protein | A5CPYCFAH4_17140 | Not Available | Positive | 2033745 - 2034350 | 23413.9 |
| glycosyl transferase family 1 | A5CPYCFAH4_17150 | P24173 | Positive | 2034391 - 2035359 | 35545.3 |
| hypothetical protein | A5CPYCFAH4_17160 | Not Available | Negative | 2035462 - 2036310 | 30197.2 |
| hypothetical protein | A5CPYCFAH4_17170 | Not Available | Negative | 2036460 - 2037026 | 19736.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
