Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | subsp. vulgaris |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
696267 bp
Thymine Count
695912 bp
Guanine Count
958181 bp
Cytosine Count
962313 bp
Genome Length
3312673 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine:trna ribosyltransferase-isomerase | A5CPYCFAH4_16290 | Q5E3D1 | Positive | 1928240 - 1929451 | 45611.7 |
| proline--trna ligase | A5CPYCFAH4_16300 | P71000 | Positive | 1929511 - 1929984 | 16947.3 |
| hypothetical protein | A5CPYCFAH4_16310 | Not Available | Negative | 1930086 - 1930586 | 19139.3 |
| sodium:proton antiporter | A5CPYCFAH4_16320 | Not Available | Negative | 1930641 - 1931825 | 43318.6 |
| enolase | A5CPYCFAH4_16330 | Q5LG64 | Positive | 1932022 - 1933323 | 46464.3 |
| hypothetical protein | A5CPYCFAH4_16340 | Not Available | Negative | 1933551 - 1934537 | 36410.9 |
| hypothetical protein | A5CPYCFAH4_16350 | Not Available | Negative | 1934550 - 1935044 | 18164.6 |
| alpha-rhamnosidase | A5CPYCFAH4_16360 | T2KPL4 | Negative | 1935237 - 1937954 | 100802.0 |
| beta-mannosidase | A5CPYCFAH4_16370 | Q75W54 | Negative | 1937981 - 1940866 | 109386.0 |
| duf5005 domain-containing protein | A5CPYCFAH4_16380 | Not Available | Negative | 1940939 - 1942321 | 51962.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
